GenomeCAT - a versatile tool for the analysis and integrative visualization of DNA copy number variants

Starting from CGHPRO, a software for the analysis and visualization of array CGH data, we are creating a program for the integrative analysis of genetic and epigenetic changes identified by array and sequencing based experiment types, respectively.
The full installation package can be downloaded here. A video demonstrating the installation process can be downloaded here.
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Single View
A tool to visualize and explore single array CGH experiments. A short video introducing the features of this tool can be downloaded here.. Please also consult our Manual.
Comparative View
A tool to compare data from the same or different experiment types. Data can be averaged over genes, fixed genomic intervals or regions of interest to enable follow up statistical analysis (see Manual). A video demonstrating the workflow is available here.
Group Explorer
A tool to identify recurrent aberrations in large cohorts and to compare patterns of chromosomal aberrations between groups of patients. A Video demonstrating the workflow can be downloaded here.
Please also consult our Manual.